Identification of Clade-wide Cis-regulatory Elements from Conserved Non-coding Sequences in Solanaceae Genomes
The 6 related genomes
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The identified cisRCNEs and its predicted targets in solanaceae genomes
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Our computational pipeline
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All 12,720 cisRCNEs in 6 solanaceae genomes with maf file
cisRCNEs.submaf
(MD5:1568d5fcb2d20bff4a4c709df0d7ce9f)
All predicted 3,114 potential regulatory cisRCNE-gene pairs in tomato
ciRCNEs_gene_pairs.gff
(MD5:bc11eba7fa9c306732bf797ec964d62d)