Genomic regulatory blocks(GRBs) in cucurbitaceous genomes

Our computational pipeline

Component 1: Multiple whole-genome alignment

README
scripts (MD5:73defcf801bf23ffe3c96f00b5b6f48e)
Input data (MD5:3b42909acdb72c29fc12bc17f7899ac4)
Output data (MD5:84a2c81bd7ce94d1ae88bd71bb2a8a11)

Component 2: Identification of multiple alignment anchors (MAAs)

README
scripts (MD5:75cc461c34161471a1a5d0de58fade0f)
Input data (MD5: 315f0bc94bf9ba4cd76952fc4ed04431)
Output data (MD5: d16804a50155323c4f2001f582ef245d)

Component 3: Detection of collinearity among 7 cucurbitaceous plant genomes

README
scripts (ba5c1deae20ec6b942295d7cb622df7e)
Input data (MD5:24b6875adc422005aa64bce23734b66a)
Output data (MD5:682aabcae090156b58ecc68627b3bc3d)

Component 4: Identification of mostCons elements

README
scripts (MD5:3e3509ad0f738a6da3d92cefe9e35477)
Input data (MD5:e128d3399f24d7a043c9c256363c5701)
Output data (MD5: f6c65a87fef1f6ae76f66018d624c20a)

Component 5: Detection of genomic regulatory blocks

README
scripts
Input data (MD5:a25e470eeb076cf4d0dee156d65f7c5e)
Output data (MD5:eb135b541818fa06ef6b50aa6b57ff38)